Open yw7 opened 2 months ago
When attempting to run nnUNetv2_train with the nnUNetTrainer_DASegOrd0_NoMirroring trainer, the process crashes due to a KeyError in one of the background workers.
nnUNetv2_train
nnUNetTrainer_DASegOrd0_NoMirroring
With the following command:
nnUNetv2_train.exe 100 3d_fullres 0 -tr nnUNetTrainer_DASegOrd0_NoMirroring
Error Message:
Exception in background worker 0: 'image' Traceback (most recent call last): File "C:\Users\USER\AppData\Local\Programs\Python\Python311\Lib\site-packages\batchgenerators\dataloading\nondet_multi_threaded_augmenter.py", line 55, in producer item = transform(**item) ^^^^^^^^^^^^^^^^^ File "C:\Users\USER\AppData\Local\Programs\Python\Python311\Lib\site-packages\batchgeneratorsv2\transforms\base\basic_transform.py", line 18, in __call__ return self.apply(data_dict, **params) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\USER\AppData\Local\Programs\Python\Python311\Lib\site-packages\batchgeneratorsv2\transforms\utils\compose.py", line 13, in apply data_dict = t(**data_dict) ^^^^^^^^^^^^^^ File "C:\Users\USER\AppData\Local\Programs\Python\Python311\Lib\site-packages\batchgeneratorsv2\transforms\base\basic_transform.py", line 17, in __call__ params = self.get_parameters(**data_dict) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "C:\Users\USER\AppData\Local\Programs\Python\Python311\Lib\site-packages\batchgeneratorsv2\transforms\spatial\spatial.py", line 58, in get_parameters dim = data_dict['image'].ndim - 1 ~~~~~~~~~^^^^^^^^^ KeyError: 'image'
Is the nnUNetTrainer_DASegOrd0_NoMirroring trainer compatible with nnUNetv2 2.5.1?
Any assistance in resolving this issue would be greatly appreciated. Thank you!
When attempting to run
nnUNetv2_train
with thennUNetTrainer_DASegOrd0_NoMirroring
trainer, the process crashes due to a KeyError in one of the background workers.With the following command:
Error Message:
Is the
nnUNetTrainer_DASegOrd0_NoMirroring
trainer compatible with nnUNetv2 2.5.1?Any assistance in resolving this issue would be greatly appreciated. Thank you!