how to make sure to run consolidate_folds in the output folder of the model first!

MIC-DKFZ / nnUNet

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how to make sure to run consolidate_folds in the output folder of the model first! #2559

Open kid-10590 opened 3 weeks ago

kid-10590 commented 3 weeks ago

WARNING! Cannot run postprocessing because the postprocessing file is missing. Make sure to run consolidate_folds in the output folder of the model first! The folder you need to run this in is /data/NPCTeam/HZA/grad_design/LWYtrainedModels/nnUNet/3d_fullres/Task905_Crohn/nnUNetTrainerV2__nnUNetPlansv2.1

sten2lu commented 2 days ago

Hi @kid-10590,

could you please give me more details about the version of nnU-Net you are using?

Best regards, Carsten