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MICA-MNI / ENIGMA

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠
https://enigma-toolbox.readthedocs.io
BSD 3-Clause "New" or "Revised" License
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More surface to plot visualization #10

Closed gourdchen closed 2 years ago

gourdchen commented 2 years ago

The visualiztion of surface in enigma toolbox is so beautiful and convenient. However, the surfaces in it are just two: the pial of fsa and conte69. How could I do if I want to add a inflated surface to plot？

saratheriver commented 2 years ago

Hello!

Thank you! We're working on making the function a bit more flexible. But for now you could add your inflated surfaces in the same folder as the other surfaces and add an extra "if" statement in the plot_cortical script where it loads the surfaces.

Does this make sense?

Sara.

gourdchen commented 2 years ago

Thanks for your reply!! I found there are two files that seem like same: " lh.surf.gii" and "lh.gii". I just add the **lh.gii file and it works. Am I right? Are there any other documents required such as "lh.sulc"?

saratheriver commented 2 years ago

No you only need to add the lh.surf.gii and rh.surf.gii files!