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MICA-MNI / ENIGMA

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠
https://enigma-toolbox.readthedocs.io
BSD 3-Clause "New" or "Revised" License
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About the Connectivity Data in the ENIGMA Toolbox #28

Closed WY-SHI closed 1 year ago

WY-SHI commented 1 year ago

Hi @saratheriver,

Recently, I used the functional and structural connectivity data provided by the useful toolbox for exploring the relationship between brain function and structure, also the effect caused by using different parcellations. However, the Glasser_360 and Schaefer templates are both partitioned to some extent based on functional information. I trying to introduce 'Brainneome Atlas', which is generated using structural information for further comparison.

So, I wonder if you can add the functional and structural connectivity data generated with Brainnetome Atlas into ENIGMA Toolbox, or provide the detailed parameters and subject list of HCP used for generating the connectivity data, especially regarding the DTI data processing? If there is a publicly available code, it would be even better.

Thanks a lot!

saratheriver commented 1 year ago

Hello,

The data was processed using micapipe, an open-source and fully automated processing pipeline for multimodal MRI data (https://micapipe.readthedocs.io/en/latest/).

The subject list we used is here hcp_subject_list.txt

Hope this helps!