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MICA-MNI / micapipe

micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
http://micapipe.readthedocs.io
GNU General Public License v3.0
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example docker command in documentation incorrectly specifies freesurfer license #45

Closed dkp closed 1 year ago

dkp commented 2 years ago

A docker command that uses -v path/to/your/freesurfer_license_file.txt:/opt/freesurfer-6.0.0/freesurfer_license_file.txt \ as specified in the documentation fails immediately saying that the freesurfer license.txt cannot be found. The correct bind mount appears to be as follows: -v path/to/your/freesurfer_license_file.txt:/opt/freesurfer-6.0.0/license.txt \

PeerHerholz commented 2 years ago

Hi @dkp,

thx for catching this, I think I made a copy-paste error. Sorry for this. We will update the docs respectively asap.

Cheers, Peer

rcruces commented 1 year ago

This issue was fixed in some point. see https://micapipe.readthedocs.io/en/latest/pages/01.install/index.html