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MICA-MNI / micapipe

micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
http://micapipe.readthedocs.io
GNU General Public License v3.0
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Warning message #94

Closed araikes closed 9 months ago

araikes commented 11 months ago

No error today... Just a warning for you to note. Running -proc_flair with -threads 8 gives the following at the end of the processing. Everything appears to map without issue though.

[ INFO ]..... Mapping flair to fsLR-32k, fsLR-5k and fsaverage5 

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS

libgomp: Invalid value for environment variable OMP_NUM_THREADS
rcruces commented 9 months ago

I will close this issue, but we did look into it. It looks like a warning that does not affect the performance of the pipeline