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MICLab-Unicamp / e2dhipseg

This contains official implementation for Extended 2D Volumetric Consensus Hippocampus Segmentation
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No module named 'orientation_detector' #4

Closed zfy514 closed 3 years ago

zfy514 commented 3 years ago

Hello, I want to ask a question. Is this orientation_detector library written by myself? I downloaded it and I didn’t find it.ModuleNotFoundError: No module named 'orientation_detector'

dscarmo commented 3 years ago

Hello, how are you trying to run that you are getting this error?

What command, what python version.

zfy514 commented 3 years ago

Hello, how are you trying to run that you are getting this error?

What command, what python version. Hi, When I ran this code, it appeared this error （File "C:\Users\lenovo\Desktop\e2dhipseg-0.1\train_evaluate.py", line 30, in from orientation_detector import OrientationDetector

ModuleNotFoundError: No module named 'orientation_detector'） environment：python3.7.9
Maybe can you send me some sample pre-processed data to zhangfy514@163.com ? Thank for your reply!

dscarmo commented 3 years ago

I just removed this code, was legacy code.

Note that this repository is mainly intended to use with the "python3 run.py" entry point for prediction, i cant guarantee the training code will work in all environments. Recently we had a contribution implementing Windows support. Have a look at the README update!

Thanks for reporting this issue. Do report if you can run after updating your code.

zfy514 commented 3 years ago

I just removed this code, was legacy code.

Note that this repository is mainly intended to use with the "python3 run.py" entry point for prediction, i cant guarantee the training code will work in all environments. Recently we had a contribution implementing Windows support. Have a look at the README update!

Thanks for reporting this issue. Do report if you can run after updating your code. This error occurred in Windows environment, cause my Ubuntu not meet the minimum requirements(only 4GB of RAM)；So may I ask your new version code in Windows? And the datasets with processed in google drive if it is convenient.

APPRECIATE !!!

dscarmo commented 3 years ago

Is everything ok now? Can i close the issue?

zfy514 commented 3 years ago

现在一切都好吗？我可以解决这个问题吗？ It’s still the error, I really don’t know how to deal with it

dscarmo commented 3 years ago

Did you update your code before trying again? With a git pull?

zfy514 commented 3 years ago

Did you update your code before trying again? With a git pull?

Hello, can you share me a complete code program at yydelovely@gmail.com,Thanks for your help

dscarmo commented 3 years ago

Hello @zfy514, have you managed to solve your problem? I believe you should be able to run this (update your code first with a git pull).

dscarmo commented 3 years ago

Closing this issue due to inactivity

DannTerra commented 3 years ago

Diedre! Há alguma dica de execução para gerar as métricas (DICE, RECALL, etc) junto com o resultado de cada execução?

dscarmo commented 3 years ago

Diedre! Há alguma dica de execução para gerar as métricas (DICE, RECALL, etc) junto com o resultado de cada execução?

Olá!

Em geral eu faço um script Python que lê as máscaras que você possui, comparando (o volume inteiro) com o resultado do modelo.

Tenha certeza de que elas estão alinhadas, visualizando antes, e que a função que você esta usando é apropriada para o caso volumétrico, alguns repositórios implementam o DICE só para imagens 2D.