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MIT-LCP / mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
https://mimic.mit.edu
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Not able to download dataset with gsutil or wget #1007

Closed Radioscientific closed 3 years ago

Radioscientific commented 3 years ago

Dear Reader,

I have been trying to download the MIMIC-CXR dataset, I tried both methods given in this address (https://mimic-cxr.mit.edu/about/download/). When I use gsutil method, I get the error : AccessDeniedException: 403 'my_email_address' does not have storage.objects.list access to the Google Cloud Storage bucket. Even though I have created an account through physionet and have permission, this error with Google Cloud Storage persists. When I use wget method, as said in another issue, html file is downloaded where the files seem to be not existing or moved. Can you please show me how to overcome these issues? Thanks in advance !

tompollard commented 3 years ago

@Radioscientific sorry to hear that you're having issues accessing the data. We are aware that our cloud documentation needs improvement and this is on our list of things to address! Have you clicked the "Request access to the files using the Google Cloud Storage Browser" link at: https://physionet.org/content/mimic-cxr/2.0.0/#files ?

Radioscientific commented 3 years ago

Thank you for your response. Google Cloud request has made it possible to start the download process. Wget still had an issue, the link provided within downloaded file is broken, just for your notice. Thanks once again !

Tom Pollard @.***>, 31 Mar 2021 Çar, 21:47 tarihinde şunu yazdı:

@Radioscientific https://github.com/Radioscientific sorry to hear that you're having issues accessing the data. We are aware that our cloud documentation needs improvement and this is on our list of things to address! Have you clicked the "Request access to the files using the Google Cloud Storage Browser" link at: https://physionet.org/content/mimic-cxr/2.0.0/#files ?

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