MIMIC-IV v2.2 updates - Githubissues

MIT-LCP / mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases

https://mimic.mit.edu

MIT License

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MIMIC-IV v2.2 updates #1469

Closed alistairewj closed 1 year ago

alistairewj commented 1 year ago

Many updates, mostly for building with MIMIC-IV v2.2

psql, mysql, sqlite, bigquery, and duckdb scripts updated
- changed to mimiciv_* prefix in duckdb for consistency with the rest of the builds
GitHub action for duckdb (untested)
validation script row counts updated
mimic-iv-note build scripts
postgres concepts now set search_path

Thanks also to @schu and @DopamineLcy for making PRs off this, made my life easy!