How to calculate qsofa score from MIMIC iv

[Alanthu]

Prerequisites

• [X] Put an X between the brackets on this line if you have done all of the following:
  • Checked the online documentation: https://mimic.mit.edu/
  • Checked that your issue isn't already addressed: https://github.com/MIT-LCP/mimic-code/issues?utf8=%E2%9C%93&q=

Description

I noticed that qsofa score isn't be mentioned in MIMIC-iv. Are there any method to extract qSOFA score in MIMIC-iv? Thanks!

[alistairewj]

You could pretty easily calculate it for MIMIC-IV-ICU but it's not super useful since qSOFA is meant to be used before ICU admission.

Might make the most sense to try and calculate it for MIMIC-IV-ED, but I don't think GCS is there.

There are some (poorly organized) queries here which we used for the Sepsis-3 paper we did in MIMIC-III: https://github.com/alistairewj/sepsis3-mimic/tree/master/query

Should be able to copy the qSOFA one and adapt it to the other queries available in MIMIC-IV relatively quickly