Similar ISSUE when calculating Sofa Score (mimic-iii/concepts/pivot/pivoted_sofa.sql) and can't find several data. But it does not apply to my situation
Description
I am trying to write an SQL for a modified version of the SOFA score based on mimic-iii/concepts/pivot/pivoted_sofa.sql. However, when I try to run pivoted_sofa.sql (I haven't made any change yet), it reports "Not found: Table physionet-data:mimiciii_derived.pivoted_uo was not found in location US " Error
Since in README for concepts folder, it mentions
You do not need to generate the concepts if you are using BigQuery! They have already been generated for you. If you have access to MIMIC-III on BigQuery, look under physionet-data.mimic_derived.
So I checked the file under the direction of physionet-data.mimic_derived in my BigQuery, to see if I could find the result of mimic-iii/concepts/pivot/pivoted_uo.sql. As folder columns show at the left of the image, pivoted_uo is missing. I can see other files (i.e. pivoted_gcs) and am able to access them through SQL.
Any idea why only mimiciii_derived.pivoted_uo is missing?
Prerequisites
Description
I am trying to write an SQL for a modified version of the SOFA score based on
mimic-iii/concepts/pivot/pivoted_sofa.sql
. However, when I try to run pivoted_sofa.sql
(I haven't made any change yet), it reports "Not found: Table physionet-data:mimiciii_derived.pivoted_uo was not found in location US " ErrorSince in README for concepts folder, it mentions
So I checked the file under the direction of
physionet-data.mimic_derived
in my BigQuery, to see if I could find the result ofmimic-iii/concepts/pivot/pivoted_uo.sql
. As folder columns show at the left of the image, pivoted_uo is missing. I can see other files (i.e.pivoted_gcs
) and am able to access them through SQL.Any idea why only
mimiciii_derived.pivoted_uo
is missing?