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MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
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Finding lipid components in parenteral nutrition #1814

Open tdgfrost opened 1 month ago

tdgfrost commented 1 month ago

Prerequisites

Description

Similar to issue #799 - I have access to MIMIC-IV and I can see how TPN ingredients can be documented both in inputevents and also in ingredientevents. However, I'm having difficulty finding the lipid components for TPN w/ Lipids, which frequently has no additional lipid information under either of the above tables. Do you have any other suggestions of where I might be able to find this information? I've reproduced an example below where I've listed all labels associated with a particular linkorderid in both tables for TPN w/ Lipids.

inputevents: orderid linkorderid label amount amountuom
3616457 3616457 TPN w/ Lipids 643.233867 mL
3616457 3616457 Dextrose PN 108.854961 grams
3616457 3616457 Amino Acids 27.21374 grams
ingredientevents: orderid linkorderid label amount amountuom
3616457 3616457 Protein 27.21374 grams
3616457 3616457 Water 643.233867 mL
3616457 3616457 Calories 478.961836 Kcal
3616457 3616457 Parenteral Nutrition Ingredient 643.233867 mL
alistairewj commented 2 weeks ago

I'll look but AFAIK I included everything when creating ingredientevents so this may mean lipids don't exist in the raw data.. which would be unexpected!