Open bemoody opened 1 year ago
It looks like it happens during the installation of Pillow:
2023-05-08T17:48:34.8617003Z • Installing google-api-python-client (1.12.8)
2023-05-08T17:48:34.9939452Z • Installing hdn-research-environment (1.4.0)
2023-05-08T17:48:35.0242514Z • Installing html2text (2018.1.9)
2023-05-08T17:48:35.0413399Z • Installing pdfminer-six (20211012)
2023-05-08T17:48:35.1899480Z • Installing pillow (9.3.0)
2023-05-08T17:48:36.8358673Z
2023-05-08T17:48:36.8361018Z StopIteration
2023-05-08T17:48:36.8361294Z
2023-05-08T17:48:36.8361384Z 0
2023-05-08T17:48:36.8361523Z
2023-05-08T17:48:36.8362140Z at /usr/lib/python3.9/json/decoder.py:353 in raw_decode
2023-05-08T17:48:36.8639834Z 349│ have extraneous data at the end.
2023-05-08T17:48:36.8659823Z 350│
2023-05-08T17:48:36.8668539Z 351│ """
2023-05-08T17:48:36.8674349Z 352│ try:
2023-05-08T17:48:36.8683760Z → 353│ obj, end = self.scan_once(s, idx)
2023-05-08T17:48:36.8691703Z 354│ except StopIteration as err:
2023-05-08T17:48:36.8736057Z 355│ raise JSONDecodeError("Expecting value", s, err.value) from None
2023-05-08T17:48:36.8746621Z 356│ return obj, end
2023-05-08T17:48:36.8752092Z 357│
2023-05-08T17:48:36.8768756Z
2023-05-08T17:48:36.8772511Z The following error occurred when trying to handle this error:
2023-05-08T17:48:36.8776204Z
2023-05-08T17:48:36.8780044Z
2023-05-08T17:48:36.8784186Z JSONDecodeError
2023-05-08T17:48:36.8791300Z
2023-05-08T17:48:36.8817220Z Expecting value: line 1 column 1 (char 0)
2023-05-08T17:48:36.8833013Z
2023-05-08T17:48:36.8833288Z at /usr/lib/python3.9/json/decoder.py:355 in raw_decode
2023-05-08T17:48:36.9011745Z 351│ """
2023-05-08T17:48:36.9026209Z 352│ try:
2023-05-08T17:48:36.9032211Z 353│ obj, end = self.scan_once(s, idx)
2023-05-08T17:48:36.9086272Z 354│ except StopIteration as err:
2023-05-08T17:48:36.9094255Z → 355│ raise JSONDecodeError("Expecting value", s, err.value) from None
2023-05-08T17:48:36.9109332Z 356│ return obj, end
2023-05-08T17:48:36.9110057Z 357│
2023-05-08T17:48:36.9110209Z
2023-05-08T17:48:36.9117211Z • Installing psycopg2 (2.9.5)
2023-05-08T17:48:36.9172428Z • Installing pyopenssl (23.1.1)
2023-05-08T17:48:37.0958564Z • Installing python-decouple (3.4)
2023-05-08T17:48:37.2476221Z • Installing python-json-logger (2.0.2)
2023-05-08T17:48:37.3648740Z • Installing requests-mock (1.9.3)
2023-05-08T17:48:37.3746305Z • Installing requests-oauthlib (1.3.0)
2023-05-08T17:48:37.5382945Z • Installing selenium (3.141.0)
2023-05-08T17:48:37.5994547Z • Installing sentry-sdk (1.14.0)
2023-05-08T17:48:37.7382340Z • Installing uwsgi (2.0.21)
2023-05-08T17:48:38.0564982Z • Installing zxcvbn (4.4.28)
2023-05-08T17:49:01.5442107Z ##[error]Process completed with exit code 1.
For me it is reasonably common for a PR to fail when installing packages (across all repos, not just this repo, maybe 1/100 PRs?). I'd always put this down to a network problem.
Another transient error (this one happened in pull #2113):
2023-10-17T15:46:55.1948647Z
2023-10-17T15:46:55.1949022Z ChefBuildError
2023-10-17T15:46:55.1949240Z
2023-10-17T15:46:55.1949813Z Backend 'setuptools.build_meta:__legacy__' is not available.
2023-10-17T15:46:55.1952728Z
2023-10-17T15:46:55.1953571Z at /env3/lib/python3.11/site-packages/poetry/installation/chef.py:147 in _prepare
2023-10-17T15:46:55.2011685Z 143│
2023-10-17T15:46:55.2014891Z 144│ error = ChefBuildError("\n\n".join(message_parts))
2023-10-17T15:46:55.2018449Z 145│
2023-10-17T15:46:55.2019266Z 146│ if error is not None:
2023-10-17T15:46:55.2023009Z → 147│ raise error from None
2023-10-17T15:46:55.2023711Z 148│
2023-10-17T15:46:55.2026362Z 149│ return path
2023-10-17T15:46:55.2027047Z 150│
2023-10-17T15:46:55.2030606Z 151│ def _prepare_sdist(self, archive: Path, destination: Path | None = None) -> Path:
2023-10-17T15:46:55.2034533Z
2023-10-17T15:46:55.2036848Z Note: This error originates from the build backend, and is likely not a problem with poetry but with jwcrypto (1.4.2) not supporting PEP 517 builds. You can verify this by running 'pip wheel --use-pep517 "jwcrypto (==1.4.2)"'.
2023-10-17T15:46:55.2040154Z
2023-10-17T15:46:55.5138771Z ##[error]Process completed with exit code 1.
A workflow run for one of Lama's pull requests failed for no obvious reason. Re-running the workflow magically made it work. The error clearly had nothing to do with the pull request in question.
The error message was:
I have no idea what this means. This message was apparently produced by either the command
poetry config virtualenvs.create false
orpoetry install --no-root
(guessing it was the latter? it's not apparent from the log.)As far as I can see, the first workflow run (which failed) and the second (which passed) used exactly the same container and exactly the same set of Python packages, as well as using exactly the same Git commit (ddea7b56243292cba23040939cb0e3918e4785ba).
Complete logs are here:
https://challenge.physionet.org/benjamin/pnstuff/4917997795-fail.zip
https://challenge.physionet.org/benjamin/pnstuff/4917997795-pass.zip