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MIT-SPARK / Kimera-Semantics

Real-Time 3D Semantic Reconstruction from 2D data
BSD 2-Clause "Simplified" License
633 stars 134 forks source link

catkin build error #37

Closed gaotao19890725 closed 3 years ago

gaotao19890725 commented 3 years ago

gaotao@gaotao-desktop:~/data/catkin_ws$ catkin_make Base path: /home/gaotao/data/catkin_ws Source space: /home/gaotao/data/catkin_ws/src Build space: /home/gaotao/data/catkin_ws/build Devel space: /home/gaotao/data/catkin_ws/devel Install space: /home/gaotao/data/catkin_ws/install

Running command: "make cmake_check_build_system" in "/home/gaotao/data/catkin_ws/build"

-- Using CATKIN_DEVEL_PREFIX: /home/gaotao/data/catkin_ws/devel -- Using CMAKE_PREFIX_PATH: /home/gaotao/data/catkin_ws/devel;/opt/ros/melodic -- This workspace overlays: /home/gaotao/data/catkin_ws/devel;/opt/ros/melodic -- Found PythonInterp: /usr/bin/python2 (found suitable version "2.7.17", minimum required is "2") -- Using PYTHON_EXECUTABLE: /usr/bin/python2 -- Using Debian Python package layout -- Using empy: /usr/bin/empy -- Using CATKIN_ENABLE_TESTING: ON -- Call enable_testing() -- Using CATKIN_TEST_RESULTS_DIR: /home/gaotao/data/catkin_ws/build/test_results -- Found gtest sources under '/usr/src/googletest': gtests will be built -- Found gmock sources under '/usr/src/googletest': gmock will be built -- Found PythonInterp: /usr/bin/python2 (found version "2.7.17") -- Using Python nosetests: /usr/bin/nosetests-2.7 -- catkin 0.7.28 -- BUILD_SHARED_LIBS is on -- BUILD_SHARED_LIBS is on -- ~~~~~~~~~~~~~ -- ~~ traversing 4 packages in topological order: -- ~~ - catkin_simple -- ~~ - kimera (metapackage) WARNING: The CMakeLists.txt of the metapackage 'kimera' contains non standard content. Use the content of the following file instead: /home/gaotao/data/catkin_ws/build/catkin_generated/metapackages/kimera/CMakeLists.txt -- ~~ - kimera_semantics -- ~~ - kimera_semantics_ros -- ~~~~~~~~~~~~~ CMake Error at /opt/ros/melodic/share/catkin/cmake/catkin_workspace.cmake:100 (message): This workspace contains non-catkin packages in it, and catkin cannot build a non-homogeneous workspace without isolation. Try the 'catkin_make_isolated' command instead. Call Stack (most recent call first): CMakeLists.txt:69 (catkin_workspace)

-- Configuring incomplete, errors occurred! See also "/home/gaotao/data/catkin_ws/build/CMakeFiles/CMakeOutput.log". See also "/home/gaotao/data/catkin_ws/build/CMakeFiles/CMakeError.log". Makefile:320: recipe for target 'cmake_check_build_system' failed make: *** [cmake_check_build_system] Error 1 Invoking "make cmake_check_build_system" failed gaotao@gaotao-desktop:~/data/catkin_ws$ catkin_make_isolated Base path: /home/gaotao/data/catkin_ws Source space: /home/gaotao/data/catkin_ws/src Build space: /home/gaotao/data/catkin_ws/build_isolated Devel space: /home/gaotao/data/catkin_ws/devel_isolated Install space: /home/gaotao/data/catkin_ws/install_isolated

~~  traversing 4 packages in topological order:
~~  - catkin_simple
~~  - kimera
~~  - kimera_semantics
~~  - kimera_semantics_ros

==> Processing catkin package: 'catkin_simple' Makefile exists, skipping explicit cmake invocation... ==> make cmake_check_build_system in '/home/gaotao/data/catkin_ws/build_isolated/catkin_simple' ==> make -j4 -l4 in '/home/gaotao/data/catkin_ws/build_isolated/catkin_simple' <== Finished processing package [1 of 4]: 'catkin_simple'

==> Processing catkin package: 'kimera' ==> Building with env: '/home/gaotao/data/catkin_ws/devel_isolated/catkin_simple/env.sh' Makefile exists, skipping explicit cmake invocation... ==> make cmake_check_build_system in '/home/gaotao/data/catkin_ws/build_isolated/kimera' ==> make -j4 -l4 in '/home/gaotao/data/catkin_ws/build_isolated/kimera' <== Finished processing package [2 of 4]: 'kimera'

==> Processing catkin package: 'kimera_semantics' ==> Building with env: '/home/gaotao/data/catkin_ws/devel_isolated/kimera/env.sh' Makefile exists, skipping explicit cmake invocation... ==> make cmake_check_build_system in '/home/gaotao/data/catkin_ws/build_isolated/kimera_semantics' ==> make -j4 -l4 in '/home/gaotao/data/catkin_ws/build_isolated/kimera_semantics' [ 37%] Building CXX object CMakeFiles/kimera_semantics.dir/src/semantic_tsdf_integrator_factory.cpp.o [ 50%] Building CXX object CMakeFiles/kimera_semantics.dir/src/semantic_integrator_base.cpp.o [ 50%] Building CXX object CMakeFiles/kimera_semantics.dir/src/color.cpp.o [ 50%] Building CXX object CMakeFiles/kimera_semantics.dir/src/semantic_tsdf_integrator_fast.cpp.o In file included from /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/src/semantic_tsdf_integrator_factory.cpp:36:0: /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/include/kimera_semantics/semantic_tsdf_integrator_factory.h:42:10: fatal error: voxblox/integrator/tsdf_integrator.h: No such file or directory

include <voxblox/integrator/tsdf_integrator.h>

      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

compilation terminated. CMakeFiles/kimera_semantics.dir/build.make:134: recipe for target 'CMakeFiles/kimera_semantics.dir/src/semantic_tsdf_integrator_factory.cpp.o' failed make[2]: [CMakeFiles/kimera_semantics.dir/src/semantic_tsdf_integrator_factory.cpp.o] Error 1 make[2]: Waiting for unfinished jobs.... In file included from /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/include/kimera_semantics/color.h:17:0, from /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/src/color.cpp:13: /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/include/kimera_semantics/common.h:9:10: fatal error: voxblox/core/block_hash.h: No such file or directory

include <voxblox/core/block_hash.h>

      ^~~~~~~~~~~~~~~~~~~~~~~~~~~

compilation terminated. CMakeFiles/kimera_semantics.dir/build.make:62: recipe for target 'CMakeFiles/kimera_semantics.dir/src/color.cpp.o' failed make[2]: *** [CMakeFiles/kimera_semantics.dir/src/color.cpp.o] Error 1 In file included from /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/src/semantic_tsdf_integrator_fast.cpp:37:0: /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/include/kimera_semantics/semantic_tsdf_integrator_fast.h:42:10: fatal error: voxblox/integrator/tsdf_integrator.h: No such file or directory

include <voxblox/integrator/tsdf_integrator.h>

      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

In file included from /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/src/semantic_integrator_base.cpp:37:0: /home/gaotao/data/catkin_ws/src/Kimera-Semantics/kimera_semantics/include/kimera_semantics/semantic_integrator_base.h:45:10: fatal error: voxblox/integrator/tsdf_integrator.h: No such file or directory

include <voxblox/integrator/tsdf_integrator.h>

      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

compilation terminated. compilation terminated. CMakeFiles/kimera_semantics.dir/build.make:110: recipe for target 'CMakeFiles/kimera_semantics.dir/src/semantic_integrator_base.cpp.o' failed make[2]: [CMakeFiles/kimera_semantics.dir/src/semantic_integrator_base.cpp.o] Error 1 CMakeFiles/kimera_semantics.dir/build.make:158: recipe for target 'CMakeFiles/kimera_semantics.dir/src/semantic_tsdf_integrator_fast.cpp.o' failed make[2]: [CMakeFiles/kimera_semantics.dir/src/semantic_tsdf_integrator_fast.cpp.o] Error 1 CMakeFiles/Makefile2:67: recipe for target 'CMakeFiles/kimera_semantics.dir/all' failed make[1]: [CMakeFiles/kimera_semantics.dir/all] Error 2 Makefile:140: recipe for target 'all' failed make: [all] Error 2 <== Failed to process package 'kimera_semantics': Command '['/home/gaotao/data/catkin_ws/devel_isolated/kimera/env.sh', 'make', '-j4', '-l4']' returned non-zero exit status 2

Reproduce this error by running: ==> cd /home/gaotao/data/catkin_ws/build_isolated/kimera_semantics && /home/gaotao/data/catkin_ws/devel_isolated/kimera/env.sh make -j4 -l4

Command failed, exiting. gaotao@gaotao-desktop:~/data/catkin_ws$

ToniRV commented 3 years ago

@gaotao19890725 it seems like you missed installing kimera's dependencies no? Just run :

# For ssh:
wstool merge Kimera-Semantics/kimera/install/kimera_semantics_ssh.rosinstall
# For https:
#wstool merge Kimera-Semantics/kimera/install/kimera_semantics_https.rosinstall

# Download and update all dependencies
wstool update

in https://github.com/MIT-SPARK/Kimera-Semantics#b-kimera-semantics-installation

shaoxh commented 2 years ago

Hello! I used wstool update failed because of connection time out, so I clone every project as .rosinstall name it. The "kimera_semantic" part is cloned in this path: /home/tongji/catkin_ws_kimera/src. The "voxblox" part is also cloned in this path: /home/tongji/catkin_ws_kimera/src. But this error is still there. A lot of code files in kimera_semantic could not find those "*.h" files in "voxblox". Could you please tell the reason for that? @ToniRV @gaotao19890725 Thanks!

It is stupid. I forgot to make clean. So the old build relations with these broken files were still there. Just remember to make clean or remove the built files before you catkin build again!