Make Cutadapt Script not dependent on file names

MMARINeDNA / metabarcoding_QAQC_pipeline

Pipeline scripts for initial quality control, ASV assignment, taxonomic classification, and preliminary data visualization

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Make Cutadapt Script not dependent on file names #11

Open alexandriai168 opened 1 year ago

alexandriai168 commented 1 year ago

Just feels kinda clunky and not everyone will have the same filenames as us. It can also be a source of errors with our data. Not a high priority but something to note.