Could you do some documentation of the metadata folder and how it is used? In particular, the key parameters for running the pipeline are in primer_data.csv, within metadata, and that's probably not obvious to users. Also, it would be good to have clear explanations about what each of the key parameters in there does: min_amplicon_length, max_trim, and so on.
Could you do some documentation of the metadata folder and how it is used? In particular, the key parameters for running the pipeline are in
primer_data.csv, withinmetadata, and that's probably not obvious to users. Also, it would be good to have clear explanations about what each of the key parameters in there does: min_amplicon_length, max_trim, and so on.