MMARINeDNA / metabarcoding_QAQC_pipeline

Pipeline scripts for initial quality control, ASV assignment, taxonomic classification, and preliminary data visualization
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R package dependencies -- Primer_test_prelim_report.qmd #9

Open invertdna opened 1 year ago

invertdna commented 1 year ago

Because no CRAN mirror is set for install.packages(), Primer_test_prelim_report.qmd will die if not all the package dependencies are already installed. I suggest using making the dependencies explicit and forcing the user to install them, rather than trying to do it automatically (which is a bit forceful, and might be seen as invasive).