Optimize generate-interactors for performance.

MOZI-AI / annotation-scheme

Human Gene annotation service backend

GNU General Public License v3.0

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Optimize generate-interactors for performance. #132

Closed linas closed 4 years ago

linas commented 4 years ago

After this patch, as reported in issue #103, this function now runs 150x faster, which allows pathway-gene-interactors tu run more than twice as fast. See also issue #98 for a general overview.

linas commented 4 years ago

Attention: I have NOT actually tested this patch; I have worked with a previous version of it that worked as claimed. I believe I did everything correctly, here.

Habush commented 4 years ago

The pathway-gene-interactors test fails. @tanksha can you check this?