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MOZI-AI / knowledge-import

Import scripts for the Bio-Atomspace
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parse molecular complex #33

Closed noskill closed 4 years ago

noskill commented 4 years ago

parse molecular complex, use ContextLink with MemberLink for cellular locations:

(ContextLink
    (MemberLink
        (MoleculeNode "Uniprot:P12235")
        (ConceptNode "PA165111376"))
    (EvaluationLink
        (PredicateNode "has_location")
        (ListLink
            (MoleculeNode "Uniprot:P12235")
            (ConceptNode "GO:0005622"))))
noskill commented 4 years ago

Molecular complex is represented by MoleculeNode + Member links:

(MemberLink
    (MoleculeNode "Uniprot:Q04844")
    (MoleculeNode "nicotinic acetylcholine receptor"))
(MemberLink
    (MoleculeNode "Uniprot:P11230")
    (MoleculeNode "nicotinic acetylcholine receptor"))
mjsduncan commented 4 years ago

thanks, @noskill !