MPBA / pyphysio

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Issue with the Annotate Option of IBI #60

Open dhuzard opened 3 years ago

dhuzard commented 3 years ago

Hi ! Thank you very much for this great tool ! I'm still discovering most of the modules and options that exit but so far I cannot properly use the Annotate option for the IBI. I am running and adapting the jupyter notebook examples (which I use in Jupyter Lab, on windows) but I cannot do anything after running the Annotate code # edit IBI ibi_ok = ph.Annotate(ecg, ibi)()

Moreover, is there a interactive pointcarré plot that exists in order to select the beats that we want to integrate in the analysis and sort the ectopic beats. I used to use the Labchart HRV module: https://www.adinstruments.com/support/videos/hrv-20 and it was pretty convenient.

I attached the ECG example that I used, and for which the IBI detection is pretty bad I think. Mouse_example_ecg-1000Hz-.txt

Let me know if you need more details, best regards, Damien