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MPI-Dortmund
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napari-tomotwin
Tool for the work with TomoTwin
Mozilla Public License 2.0
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fixes for the latest cluster plotter
#34
thorstenwagner
closed
2 days ago
0
Napari stops working after importing umap data
#33
saugatkandel
opened
4 months ago
5
New target manager
#32
thorstenwagner
closed
5 months ago
1
Update napari 0.4.19
#31
thorstenwagner
closed
7 months ago
0
Update napari 0.4.19
#30
thorstenwagner
closed
7 months ago
1
Visualize targets after clusters were selected
#29
thorstenwagner
closed
8 months ago
0
UMAP Recalculation: New option to recalculate UMAP for selected clusters
#28
thorstenwagner
closed
7 months ago
1
make label layer visible
#27
thorstenwagner
closed
9 months ago
0
Read embeddings path from metadata & Release v0.3.0
#26
thorstenwagner
closed
9 months ago
3
fix unit tests and attrs names
#25
thorstenwagner
closed
9 months ago
1
use correct attrs field
#24
thorstenwagner
closed
9 months ago
0
use pairwise_distances instead of cdist to calculate medoid
#23
thorstenwagner
closed
9 months ago
1
Calculate label mask within napari-tomotwin
#22
thorstenwagner
closed
9 months ago
2
Picking particle become laggy when images get low pass filtered and are very big
#21
thorstenwagner
closed
10 months ago
1
No freezing GUI when loading umap / writing targers by adding threading + Visualize loading with spinners
#20
thorstenwagner
closed
9 months ago
1
Fix a bug when calculating recursive umaps
#19
thorstenwagner
closed
10 months ago
0
Target calculation corrupted when index column is present
#18
thorstenwagner
closed
10 months ago
1
Use complementary colors when highlight picks in the umap
#17
thorstenwagner
closed
10 months ago
1
Add magicgui to requirements
#16
thorstenwagner
closed
10 months ago
1
Add multiple anchor points
#15
thorstenwagner
closed
10 months ago
1
make targets print is wrong
#14
thorstenwagner
closed
10 months ago
1
Update dependencies
#13
goanpeca
closed
10 months ago
1
Fix issue that circle is now drawn when clicking on tomogram
#12
thorstenwagner
closed
1 year ago
0
Mapping tomogram -> umap does not work anymore
#11
thorstenwagner
closed
1 year ago
0
> But I also confirmed on another system that there's a problem with the PyQt bits
#10
thorstenwagner
closed
1 year ago
3
Show notification when umap or label mask is not defined.
#9
thorstenwagner
closed
1 year ago
1
Load should be disabled when no label mask is provided
#8
thorstenwagner
closed
1 year ago
0
Install dependencies from conda
#7
thorstenwagner
closed
1 year ago
1
add medoid method for calculation of cluster center
#6
thorstenwagner
closed
1 year ago
2
remove not used tqdm from the requirements
#5
thorstenwagner
closed
1 year ago
0
Version 0.1.4
#4
thorstenwagner
closed
1 year ago
0
add changes for version 0.1.3
#3
thorstenwagner
closed
1 year ago
0
Make label mask activated
#2
thorstenwagner
closed
1 year ago
0
Make github actions work for py3.10
#1
mstabrin
closed
1 year ago
1