fatal error C1083: Cannot open include file: 'CGAL/AABB_tree.h': No such file or directory

[sujaybokil]

I'm trying to install the library in my command prompt using the makefile provided using GnuWin32 make.exe and am getting the below error. Can someone suggest any fix?

My system specifications: Windows 10 Intel i5-7200 CPU Python 3.7 Here is the error:

(coma) F:\Codebase\FORD_PROJECT\ModifiedAE\Mesh\mesh>make.exe "\033[0;36m----- [" mesh_package "] Installing on the local virtual environment which python\033[0m" Requirement already up-to-date: setuptools in f:\anaconda\envs\coma\lib\site-packages (from -r requirements.txt (line 1)) (46.1.3.post20200325) Collecting numpy Using cached numpy-1.18.2-cp37-cp37m-win_amd64.whl (12.8 MB) Collecting scipy Using cached scipy-1.4.1-cp37-cp37m-win_amd64.whl (30.9 MB) Collecting pyopengl Using cached PyOpenGL-3.1.5-py3-none-any.whl (2.4 MB) Collecting pillow Using cached Pillow-7.1.1-cp37-cp37m-win_amd64.whl (2.0 MB) Collecting pyzmq Using cached pyzmq-19.0.0-cp37-cp37m-win_amd64.whl (1.1 MB) Collecting pyyaml Using cached PyYAML-5.3.1-cp37-cp37m-win_amd64.whl (216 kB) Collecting opencv-python Using cached opencv_python-4.2.0.34-cp37-cp37m-win_amd64.whl (33.0 MB) Installing collected packages: numpy, scipy, pyopengl, pillow, pyzmq, pyyaml, opencv-python Attempting uninstall: numpy Found existing installation: numpy 1.18.1 Uninstalling numpy-1.18.1: Successfully uninstalled numpy-1.18.1 Successfully installed numpy-1.18.2 opencv-python-4.2.0.34 pillow-7.1.1 pyopengl-3.1.5 pyyaml-5.3.1 pyzmq-19.0.0 scipy-1.4.1 Package Version

---

certifi 2020.4.5.1 numpy 1.18.2 opencv-python 4.2.0.34 Pillow 7.1.1 pip 20.0.2 PyOpenGL 3.1.5 PyYAML 5.3.1 pyzmq 19.0.0 scipy 1.4.1 setuptools 46.1.3.post20200325 wheel 0.34.2 wincertstore 0.2 F:\ANACONDA\envs\coma\lib\site-packages\pip_internal\commands\install.py:244: UserWarning: Disabling all use of wheels due to the use of --build-option / --global-option / --install-option. cmdoptions.check_install_build_global(options) Non-user install because site-packages writeable Created temporary directory: C:\Users\SUJAYB~1\AppData\Local\Temp\pip-ephem-wheel-cache-dc4dt4a5 Created temporary directory: C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-tracker-45k8953u Initialized build tracking at C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-tracker-45k8953u Created build tracker: C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-tracker-45k8953u Entered build tracker: C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-tracker-45k8953u Created temporary directory: C:\Users\SUJAYB~1\AppData\Local\Temp\pip-install-nugo5vli Processing f:\codebase\ford_project\modifiedae\mesh\mesh Created temporary directory: C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5 Added file:///F:/Codebase/FORD_PROJECT/ModifiedAE/Mesh/mesh to build tracker 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-tracker-45k8953u' Running setup.py (path:C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\setup.py) egg_info for package from file:///F:/Codebase/FORD_PROJECT/ModifiedAE/Mesh/mesh Running command python setup.py egg_info [VERSION] read version is 0.3 running egg_info creating C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info writing C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info\PKG-INFO writing dependency_links to C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info\dependency_links.txt writing namespace_packages to C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info\namespace_packages.txt writing requirements to C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info\requires.txt writing top-level names to C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info\top_level.txt writing manifest file 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info\SOURCES.txt' reading manifest file 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info\SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\pip-egg-info\psbody_mesh.egg-info\SOURCES.txt' Source in c:\users\sujayb~1\appdata\local\temp\pip-req-build-h0yq7ms5 has version 0.3, which satisfies requirement psbody-mesh==0.3 from file:///F:/Codebase/FORD_PROJECT/ModifiedAE/Mesh/mesh Removed psbody-mesh==0.3 from file:///F:/Codebase/FORD_PROJECT/ModifiedAE/Mesh/mesh from build tracker 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-tracker-45k8953u' Skipping wheel build for psbody-mesh, due to binaries being disabled for it. Installing collected packages: psbody-mesh Created temporary directory: C:\Users\SUJAYB~1\AppData\Local\Temp\pip-record-093ivoe8 Running command 'F:\ANACONDA\envs\coma\python.exe' -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\setup.py'"'"'; file='"'"'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-record-093ivoe8\install-record.txt' --single-version-externally-managed --compile --install-headers 'F:\ANACONDA\envs\coma\Include\psbody-mesh' '--boost-location=$BOOST_ROOT' [VERSION] read version is 0.3 running install running build running build_py creating build creating build\lib.win-amd64-3.7 creating build\lib.win-amd64-3.7\psbody copying psbody-mesh-namespace__init.py -> build\lib.win-amd64-3.7\psbody creating build\lib.win-amd64-3.7\psbody\mesh copying mesh\arcball.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\colors.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\errors.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\fonts.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\landmarks.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\lines.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\mesh.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\meshviewer.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\processing.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\search.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\sphere.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\texture.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\utils.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh\version.py -> build\lib.win-amd64-3.7\psbody\mesh copying mesh__init.py -> build\lib.win-amd64-3.7\psbody\mesh creating build\lib.win-amd64-3.7\psbody\mesh\topology copying mesh\topology\connectivity.py -> build\lib.win-amd64-3.7\psbody\mesh\topology copying mesh\topology\decimation.py -> build\lib.win-amd64-3.7\psbody\mesh\topology copying mesh\topology\linear_mesh_transform.py -> build\lib.win-amd64-3.7\psbody\mesh\topology copying mesh\topology\subdivision.py -> build\lib.win-amd64-3.7\psbody\mesh\topology copying mesh\topology__init__.py -> build\lib.win-amd64-3.7\psbody\mesh\topology creating build\lib.win-amd64-3.7\psbody\mesh\geometry copying mesh\geometry\barycentric_coordinates_of_projection.py -> build\lib.win-amd64-3.7\psbody\mesh\geometry copying mesh\geometry\cross_product.py -> build\lib.win-amd64-3.7\psbody\mesh\geometry copying mesh\geometry\rodrigues.py -> build\lib.win-amd64-3.7\psbody\mesh\geometry copying mesh\geometry\triangle_area.py -> build\lib.win-amd64-3.7\psbody\mesh\geometry copying mesh\geometry\tri_normals.py -> build\lib.win-amd64-3.7\psbody\mesh\geometry copying mesh\geometry\vert_normals.py -> build\lib.win-amd64-3.7\psbody\mesh\geometry copying mesh\geometry\init.py -> build\lib.win-amd64-3.7\psbody\mesh\geometry creating build\lib.win-amd64-3.7\psbody\mesh\serialization copying mesh\serialization\serialization.py -> build\lib.win-amd64-3.7\psbody\mesh\serialization copying mesh\serialization\init__.py -> build\lib.win-amd64-3.7\psbody\mesh\serialization running build_ext [CGAL] deflating cgal from "mesh\thirdparty\CGAL-4.7.tar.gz" to "C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\build\temp.win-amd64-3.7"
building 'psbody.mesh.aabb_normals' extension creating build\temp.win-amd64-3.7\Release creating build\temp.win-amd64-3.7\Release\mesh creating build\temp.win-amd64-3.7\Release\mesh\src C:\Program Files (x86)\Microsoft Visual Studio\2019\BuildTools\VC\Tools\MSVC\14.25.28610\bin\HostX86\x64\cl.exe /c /nologo /Ox /W3 /GL /DNDEBUG /MD -DNDEBUG=1 -DCGAL_NDEBUG=1 -DMESH_CGAL_AVOID_COMPILED_VERSION=1 -DCGAL_HAS_NO_THREADS=1 -DCGAL_NO_AUTOLINK_CGAL=1 -Imesh/src -IF:\ANACONDA\envs\coma\lib\site-packages\numpy\core\include -IC:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\build\temp.win-amd64-3.7\Release\CGAL-4.7\include -I$BOOST_ROOT -IF:\ANACONDA\envs\coma\include -IF:\ANACONDA\envs\coma\include "-IC:\Program Files (x86)\Microsoft Visual Studio\2019\BuildTools\VC\Tools\MSVC\14.25.28610\include" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.18362.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.18362.0\shared" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.18362.0\um" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.18362.0\winrt" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.18362.0\cppwinrt" /EHsc /Tpmesh/src/aabb_normals.cpp /Fobuild\temp.win-amd64-3.7\Release\mesh/src/aabb_normals.obj -O3 cl : Command line warning D9002 : ignoring unknown option '-O3' aabb_normals.cpp F:\ANACONDA\envs\coma\lib\site-packages\numpy\core\include\numpy\npy_1_7_deprecated_api.h(14) : Warning Msg: Using deprecated NumPy API, disable it with #define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION C:\Users\Sujay Bokil\AppData\Local\Temp\pip-req-build-h0yq7ms5\mesh\src\AABB_n_tree.h(9): fatal error C1083: Cannot open include file: 'CGAL/AABB_tree.h': No such file or directory error: command 'C:\Program Files (x86)\Microsoft Visual Studio\2019\BuildTools\VC\Tools\MSVC\14.25.28610\bin\HostX86\x64\cl.exe' failed with exit status 2 Running setup.py install for psbody-mesh ... error Cleaning up... Removing source in C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5 Removed build tracker: 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-tracker-45k8953u' ERROR: Command errored out with exit status 1: 'F:\ANACONDA\envs\coma\python.exe' -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\setup.py'"'"'; file='"'"'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-record-093ivoe8\install-record.txt' --single-version-externally-managed --compile --install-headers 'F:\ANACONDA\envs\coma\Include\psbody-mesh' '--boost-location=$BOOST_ROOT' Check the logs for full command output. Exception information: Traceback (most recent call last): File "F:\ANACONDA\envs\coma\lib\site-packages\pip_internal\cli\base_command.py", line 186, in _main status = self.run(options, args) File "F:\ANACONDA\envs\coma\lib\site-packages\pip_internal\commands\install.py", line 404, in run use_user_site=options.use_user_site, File "F:\ANACONDA\envs\coma\lib\site-packages\pip_internal\req__init__.py", line 71, in install_given_reqs **kwargs File "F:\ANACONDA\envs\coma\lib\site-packages\pip_internal\req\req_install.py", line 829, in install scheme=scheme, File "F:\ANACONDA\envs\coma\lib\site-packages\pip_internal\operations\install\legacy.py", line 72, in install cwd=install_req.unpacked_source_directory, File "F:\ANACONDA\envs\coma\lib\site-packages\pip_internal\utils\subprocess.py", line 275, in runner spinner=spinner, File "F:\ANACONDA\envs\coma\lib\site-packages\pip_internal\utils\subprocess.py", line 242, in call_subprocess raise InstallationError(exc_msg) pip._internal.exceptions.InstallationError: Command errored out with exit status 1: 'F:\ANACONDA\envs\coma\python.exe' -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\setup.py'"'"'; file='"'"'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-req-build-h0yq7ms5\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file__, '"'"'exec'"'"'))' install --record 'C:\Users\SUJAYB~1\AppData\Local\Temp\pip-record-093ivoe8\install-record.txt' --single-version-externally-managed --compile --install-headers 'F:\ANACONDA\envs\coma\Include\psbody-mesh' '--boost-location=$BOOST_ROOT' Check the logs for full command output. 1 location(s) to search for versions of pip:

• https://pypi.org/simple/pip/ Fetching project page and analyzing links: https://pypi.org/simple/pip/ Getting page https://pypi.org/simple/pip/ Found index url https://pypi.org/simple Starting new HTTPS connection (1): pypi.org:443 https://pypi.org:443 "GET /simple/pip/ HTTP/1.1" 200 12868 Found link https://files.pythonhosted.org/packages/3d/9d/1e313763bdfb6a48977b65829c6ce2a43eaae29ea2f907c8bbef024a7219/pip-0.2.tar.gz#sha256=88bb8d029e1bf4acd0e04d300104b7440086f94cc1ce1c5c3c31e3293aee1f81 (from https://pypi.org/simple/pip/), version: 0.2 Found link https://files.pythonhosted.org/packages/18/ad/c0fe6cdfe1643a19ef027c7168572dac6283b80a384ddf21b75b921877da/pip-0.2.1.tar.gz#sha256=83522005c1266cc2de97e65072ff7554ac0f30ad369c3b02ff3a764b962048da (from https://pypi.org/simple/pip/), version: 0.2.1 Found link 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for project 'pip': discarding no candidates make.exe: *** [all] Error 1

[jcpassy]

Hi @sujaybokil, for the moment, there is no Windows support for mesh. However, there is the PR #34 by @coloss that should take care of that. It should be merged soon, we will notify you when it is done. :) Cheers!

[sujaybokil]

Thank you for the update, will be waiting for the windows version soon :)

[ShengbinWei]

I do these following: 1.Clone the version by @coloss; 2.Copy the folder CGAL which includes the header file "AABB_tree.h" into the folder mesh/src which includes "AABB_n_tree.h"; 2.Modify the CGAL/Origin.h: //CGAL_EXPORT extern const Origin ORIGIN; CGAL_EXPORT const Origin ORIGIN; //CGAL_EXPORT extern const Null_vector NULL_VECTOR; CGAL_EXPORT const Null_vector NULL_VECTOR; And then I can compile this project in windows. No full test yet, however u can try it.