There are following doubts about ld_clump and ld_clump_local functions, if I have a copy of exposed data with 10 snps. I want to clump by id grouping, with same parameter setting, ld_clump and ld_clump_local give two different results, may I know why?
Sample data
Sample code
Sample results
I guess the id variable in the dat parameter of ld_clump_local seems to be disabled. Any relevant responses greatly appreciated!
There are following doubts about ld_clump and ld_clump_local functions, if I have a copy of exposed data with 10 snps. I want to clump by id grouping, with same parameter setting, ld_clump and ld_clump_local give two different results, may I know why?
Sample data
Sample code
Sample results
I guess the id variable in the dat parameter of ld_clump_local seems to be disabled. Any relevant responses greatly appreciated!