MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density
Propagating from code comment given external feature request.
[x] #2451 allows the input image to be 4D, in which case each volume is sampled independently. Therefore, similarly to #1485, I believe that if the input number of volumes match that of an SH series the user would need to be forced to specify a command-line option indicating that the input image is to be interpreted as an SH series.
[x] Consider not permitting use of nearest-neighbour interpolation if sampling FOD amplitudes.
[x] For -precise, will need to generate Mapping::SetVoxelDir to have access to streamline-voxel intersection tangents.
Propagating from code comment given external feature request.
[x] #2451 allows the input image to be 4D, in which case each volume is sampled independently. Therefore, similarly to #1485, I believe that if the input number of volumes match that of an SH series the user would need to be forced to specify a command-line option indicating that the input image is to be interpreted as an SH series.
[x] Consider not permitting use of nearest-neighbour interpolation if sampling FOD amplitudes.
[x] For
-precise, will need to generateMapping::SetVoxelDirto have access to streamline-voxel intersection tangents.