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MS-PINPOINT
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mindGlide
Brain Segmentation with MONAI and Dynamic Unet (nn-unet)
MIT License
15
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4
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Which image to pull from Docker hub
#29
ChristineFarrugia
closed
10 hours ago
3
raise Exception("model file path does not exist: ", item)
#28
josemq
closed
10 hours ago
0
docker image name seems to be wrong
#27
insanem3rlin
closed
2 months ago
12
Build reproducibilty
#26
jstutters
closed
4 months ago
0
Container builds are not deterministic
#25
jstutters
closed
4 months ago
0
Create docker-image.yml
#24
phiphi0815
opened
5 months ago
8
Tidy up README
#23
jstutters
closed
5 months ago
0
Updated to super_mindglide model and edited brain region labels
#22
phiphi0815
closed
5 months ago
0
YY refactor run inference
#21
yuping-yang
opened
10 months ago
0
fix: correct the instructions on where the working directory should be mounted to
#20
yuping-yang
opened
10 months ago
0
Rounded float label values of segMajorityVoted to nearest int, closes #14
#19
phiphi0815
closed
1 year ago
0
Merge pull request #17 from MS-PINPOINT/master
#18
armaneshaghi
closed
1 year ago
0
Label Bug
#17
phiphi0815
closed
1 year ago
0
only working with .nii.gz
#16
armaneshaghi
closed
2 months ago
0
Docker image does not match Github
#15
pwrightkcl
closed
10 hours ago
1
Float label values for segMajorityVoted.nii.gz output image
#14
jedwingrove
closed
1 year ago
0
Record provenance with outputs
#13
jstutters
closed
10 hours ago
1
Debugging (Patients 245 baseline and 684 w024) - RuntimeError: Given groups=1, weight of size [32, 1, 3, 3, 3], expected input[4, 60, 128, 128, 64] to have 1 channels, but got 60 channels instead
#12
phiphi0815
closed
1 year ago
4
Whole brain parcellation training for all regions of Neuromorphometrics
#11
armaneshaghi
closed
5 months ago
0
updated
#10
armaneshaghi
closed
1 year ago
0
missing models
#9
armaneshaghi
closed
1 year ago
0
Updated infer_ensamble_from_container.sh to 13 models
#8
phiphi0815
closed
1 year ago
3
semgent t1c, t1p, t2, flair, pd
#7
phiphi0815
closed
1 year ago
0
Transfer ORATORIO
#6
phiphi0815
closed
1 year ago
0
Fine tuning
#5
armaneshaghi
closed
1 year ago
1
Write docker2singularity script inside scripts of MindGlide
#4
phiphi0815
closed
1 year ago
0
Prepare a proposal for Jeremy Chataway
#3
phiphi0815
closed
1 year ago
0
Get MS-STAT data
#2
phiphi0815
closed
1 year ago
0
test
#1
phiphi0815
closed
1 year ago
0