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MSKCC-Epi-Bio / gnomeR

Package to wrangle and visualize genomic data in R
https://mskcc-epi-bio.github.io/gnomeR/
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gene_binary duplicated IDs #294

Open jflynn264 opened 1 year ago

jflynn264 commented 1 year ago

Check to make sure duplicate IDs are not allowed in gene_binary and make a test for it

akriti21 commented 1 year ago

when duplicate sample IDs are entered for processing mutation data, the function returns unique rows of data. However, it does not work the same way for CNA and fusion data. I added this as well to my issue with feedback on create_gene_binary function. I added a test for the same, need to create pull request

karissawhiting commented 11 months ago

@hfuchs5 Do you want to add this to hackathon task board or do it before?

hfuchs5 commented 11 months ago

I’ll review before!Best,Hannah FuchsOn Oct 4, 2023, at 2:58 PM, karissawhiting @.***> wrote: @hfuchs5 Do you want to add this to hackathon task board or do it before?

—Reply to this email directly, view it on GitHub, or unsubscribe.You are receiving this because you were mentioned.Message ID: @.***>

hfuchs5 commented 11 months ago

Planning to make an interal function to check each

karissawhiting commented 10 months ago

Can this be closed? @hfuchs5

hfuchs5 commented 10 months ago

I need a reproducable example, I'm not experiencing it.