Internal colname messages

[karissawhiting]

What changes are proposed in this pull request?

Update internal processing of input data set names. Currently any passed genomic data is resolved to a set of internal data field names for all functions. This makes it confusing when warnings are thrown using internal assigned names, not original data set names.

If there is an GitHub issue associated with this pull request, please provide link.

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Reviewer Checklist (if item does not apply, mark is as complete)

• [x] PR branch has pulled the most recent updates from main branch. Ensure the pull request branch and your local version match and both have the latest updates from the main branch.
• [x] If a new function was added, function included in _pkgdown.yml
• [x] If a bug was fixed, a unit test was added for the bug check
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• [x] usethis::use_spell_check() runs with no spelling errors in documentation

When the branch is ready to be merged into master:

• [x] Update NEWS.md with the changes from this pull request under the heading "# cbioportalR (development version)". If there is an issue associated with the pull request, reference it in parentheses at the end update (see NEWS.md for examples).
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  • [x] Approve Pull Request
  • [x] Merge the PR

[karissawhiting]

@hfuchs5 - Could you double check there aren't any spots where I missed this column name replacement? I updated it in sanitize data functions and also create_gene_binary()

Also if you could stress test it a little more that would be great as I did end up changing quite a few internals. Thank you!!!!