Codes are not running in Jupyter notebook

[rpc-3312]

Two issues: 1) After downloading using docker and opening, codes in the Jupyter notebook are not running properly The very first code to initialize notebook is showing this error: ERROR:root:File '../library/v1.1.5/init.ipy.py' not found. 2) The notebook shows a preview of the dataset in section 1 but does not give any option to download it.

[ichobits]

same error on ubuntu 18.04

[ichobits]

ERROR:root:File `'../library/v1.1.5/init.ipy.py'` not found.
---------------------------------------------------------------------------
NameError                                 Traceback (most recent call last)
<ipython-input-2-7d6850761aa5> in <module>()
      1 # Initialize Notebook
      2 get_ipython().run_line_magic('run', '../library/v1.1.5/init.ipy')
----> 3 HTML('''<script> code_show=true;  function code_toggle() {  if (code_show){  $('div.input').hide();  } else {  $('div.input').show();  }  code_show = !code_show }  $( document ).ready(code_toggle); </script> <form action="javascript:code_toggle()"><input type="submit" value="Toggle Code"></form>''')

[u8sand]

Can you please try it with the image maayanlab/biojupies-notebooks:v1.1.5 which I've just created? Sorry about this.. If this works I'll update the latest image.

[rpc-3312]

@u8sand Thanks much for your response. I just tried with the image you suggested, but the error still exists.

ERROR:root:File `'../library/v1.1.5/init.ipy.py'` not found.
---------------------------------------------------------------------------
NameError                                 Traceback (most recent call last)
<ipython-input-1-7d6850761aa5> in <module>()
      1 # Initialize Notebook
      2 get_ipython().run_line_magic('run', '../library/v1.1.5/init.ipy')
----> 3 HTML('''<script> code_show=true;  function code_toggle() {  if (code_show){  $('div.input').hide();  } else {  $('div.input').show();  }  code_show = !code_show }  $( document ).ready(code_toggle); </script> <form action="javascript:code_toggle()"><input type="submit" value="Toggle Code"></form>''')

NameError: name 'HTML' is not defined

[u8sand]

@rpc-3312 just to confirm:

To be sure you don't somehow have a cached v1.1.5 version -- be sure to run docker pull maayanlab/biojupies-notebooks:v1.1.5 to force a re-pull.

docker run -it -p 8888:8888 -v ${PWD}:/notebooks -e NOTEBOOK_UID=<NOTEBOOK_UID> maayanlab/biojupies-notebooks:v1.1.5

Would be the new command you would execute.. somehow when I did it it worked.. can @ichobits check as well?

[rpc-3312]

@u8sand Yeah, now it works. Thanks so much!

[u8sand]

Okay the latest image has been updated.