Hi, I was using the Biojupies to quantify reads for a Quant-seq experiment. Since it uses single-end sequencing, users need to specify the average fragment size and standard deviation. I wonder what the pre-set parameters are for the Kallisto method?
Hi, I was using the Biojupies to quantify reads for a Quant-seq experiment. Since it uses single-end sequencing, users need to specify the average fragment size and standard deviation. I wonder what the pre-set parameters are for the Kallisto method?