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MaayanLab / enrichr_issues

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[Question] #28

Closed Axale42 closed 3 years ago

Axale42 commented 3 years ago

Hi, I have a general question regarding enrichR, it's an useful tools. hovewer, when performing enrichment analysis, I do not always want to use all gene as background, but a selection of genes (Like gene that are only detected by RNA-seq, or gene that are below a cut off of expression)

My question is so, is it possible to change or to give a list of background gene ?

Thanks in advance and again many thanks for this fabulous tool

AviMaayan commented 3 years ago

Hi @Axale42,

You can use this Appyter to perform such analysis: https://appyters.maayanlab.cloud/#/Independent_Enrichment_Analysis

We do not have support for customized backgrounds in the main Enrichr application.

Best,

Avi