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MaayanLab / enrichr_issues

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could you provide with code of enrichr[BUG] #45

Closed FADHLyemen closed 1 year ago

FADHLyemen commented 2 years ago

Describe the bug A clear and concise description of what the bug is.

To Reproduce Steps to reproduce the behavior:

  1. Go to '...'
  2. Click on '....'
  3. Scroll down to '....'
  4. See error

Expected behavior A clear and concise description of what you expected to happen.

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Additional context Add any other context about the problem here. if I have my own background genes, could you provide us with code to compute p-value and others parameters?

why Reactome have 2016? how to get 2022 https://maayanlab.cloud/Enrichr/

AviMaayan commented 1 year ago

Hi @FADHLyemen, We just updated the Reactome library. Best, Avi

FADHLyemen commented 1 year ago

@AviMaayan thank you, could you release your code? I want to download the library and plot the barplot by my self in ggplot? how to calculate odd ratio and combined score and old p value?

Thank you for providing all of these service to the community

AviMaayan commented 1 year ago

You can try using this Appyter: https://appyters.maayanlab.cloud/Independent_Enrichment_Analysis/