search

Magdoll / cDNA_Cupcake

Miscellaneous collection of Python and R scripts for processing Iso-Seq data
BSD 3-Clause Clear License
257 stars 103 forks source link

setup.py requires sklearn instead of scikit-learn #238

Closed cyrilcros closed 1 year ago

cyrilcros commented 1 year ago

https://github.com/Magdoll/cDNA_Cupcake/blob/81b7e7f6aeb53e15c11dd30a68a498a58e5f390a/setup.py#L40

The installation via python setup.py build / python setup.py install fails because sklearn has been deprecated (and raises error as of December 22). Switching to scikit-learn on that line succeeds.

Magdoll commented 1 year ago

Hi thank you for letting me know! That said Cupcake will be deprecated soon. FYI.