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Maggi-Chen / Inspector

A tool for evaluating long-read de novo assembly results
MIT License
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Can Inspector be used in homological polyploidy? #17

Closed zhangyixing3 closed 1 year ago

zhangyixing3 commented 1 year ago

hi , Thank you for developing such a good software。 Your article write that we have developed Inspector to comprehensively evaluate assembly quality and identify assembly errors in haploid and diploid genomes. Can I use Inspector to find structural assembly errors in homological polyploidy genome ?

Maggi-Chen commented 1 year ago

Hello Zhangyixing,

Yes, it can be applied on homological polyploid genomes. As far as there are always fewer than 3 (so <=2) alleles, Inspector can identify assembly errors accurately.

Thanks, Maggi