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MagicForrest / DGVMTools

R package for processing, analysing and visualising ouput from Dynamic Global Vegetation Models (DGVMs)
GNU General Public License v3.0
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DGVMData not found #70

Closed EstellepaleoR closed 3 years ago

EstellepaleoR commented 3 years ago

Hi Matthew,

I've been trying to compare my run with some available data such as the Biome model and always receives the error below: 

biomes.source <- defineSource(id = "DataBiomes",
   dir = system.file("extdata", "DGVMData", "HandP_PNV", "HD", package = "DGVMTools"), 
   format = DGVMData,
  name = "Haxeltine and Prentice Biomes")

Error in defineSource(id = "DataBiomes", dir = system.file("extdata", : object 'DGVMData' not found

Could you help me on how to fix this please? Thanks

MagicForrest commented 3 years ago

Hi Estelle, that is an easy one. Just exchange "DGVMData" with "NetCDF" and it should work fine.

The reason for this happening is that I replaced the previous DGVMData Format (which was rather custom and inflexible) with a much more general NetCDF Format. The NetCDF Format should be capable of reading a fairly wide range of netCDF files if they have a reasonably standard structure (ie include longitude and latitide dimensions and have a time dimension with units which are not toooo crazy).

EstellepaleoR commented 3 years ago

Hi,

Thank you so much for the quick reply Matthew. It is indeed working nicely. Should send you an email soon for more discussions on the outputs :)

Cheers

MagicForrest commented 3 years ago

Great!