MalteThodberg CAGEfightR issues

MalteThodberg / CAGEfightR

Analysis of Cap Analysis of Gene Expression (CAGE) data using Bioconductor

GNU General Public License v3.0

8 stars 2 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

How to load custom non-model species genome

#20 ckuanglim85 opened 1 month ago
1
calcShape error

#19 emidalla opened 3 months ago
6
How to add a Virus Genome into Human hg38 genome or how to add the Virus genome into the Built-in genome?

#18 truong128 opened 7 months ago
1
enhancer width

#17 ferenckata opened 1 year ago
3
bidirectional promoters

#16 jtxyz16 opened 1 year ago
1
quantifyCTSSs error: missing values present in assertion

#15 pna059 closed 1 year ago
10
quantifyCTSSs error

#14 lananh-ngn closed 2 years ago
2
Error in S4Vectors:::normarg_names(value, class(x), length(x)) : attempt to set too many names (1) on IRanges object of length 0

#13 shubha-narayan opened 2 years ago
0
enhancer with high width and overall low balance

#12 Fiona713 opened 3 years ago
6
Error in bw_mapper(seqinfo = seqinfo, strand = strand, ...) : all(width(o) == 1) is not TRUE

#11 zya226 opened 3 years ago
3
quantifyGenes function

#10 Alexadol closed 3 years ago
2
DE_genes =Filter( function(x){ x!=0} , dt[,"ClassNano"]) Error: Two subscripts required

#9 mirkocelii opened 4 years ago
1
'is.character(hits) is not TRUE' error while running assignTxID

#8 NexentaEL closed 4 years ago
4
'The 2 combined objects have no sequence levels in common' warning while running quantifyCTSSs

#7 NexentaEL closed 4 years ago
4
'seqnames must have the length of the object to construct (1) or length 1' Error

#6 smooshington closed 4 years ago
2
Error running quantifyCTSSs

#5 matthew-valentine closed 4 years ago
2
fix to histogram legend

#4 vpbrendel closed 4 years ago
8
'Problem too large' error when doing TMP normalization

#3 KevinMenden closed 5 years ago
6
Loading of CTSS/bigWig files

#2 KevinMenden closed 5 years ago
4
BC calculation stopped because some sites had negative pooled signal!

#1 bkaczkowski opened 5 years ago
20