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MangiolaLaboratory / HPCell

Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R
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complete annotation consensus #80

Open stemangiola opened 1 month ago

stemangiola commented 1 month ago

Complete the function

https://github.com/MangiolaLaboratory/HPCell/blob/4e95796cac4052bcc3274b46b9dfcc257b99be71/R/utilities.R#L911C1-L911C24

execute step by step, with input the CAQ cell annotation table including immune cells, for blueprint , monaco, and azimuth references.

I worked until line

https://github.com/MangiolaLaboratory/HPCell/blob/4e95796cac4052bcc3274b46b9dfcc257b99be71/R/utilities.R#L1124

myushen commented 3 weeks ago

Is line 1124 not producing the expected output, or is it throwing an error?

For CAQ input, renaming blueprint, monaco and azimuth column works.