MannLabs / alphapeptdeep

Deep learning framework for proteomics
Apache License 2.0
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CANNOT loading PSMs and extracting fragments for transfer learning #93

Closed qazq1 closed 11 months ago

qazq1 commented 1 year ago

When I use the 'Transfer' section to get a re-fined model, something wrong with 'Loading PSMs and extracting fragments' happened. I provided the paths of MaxQuant data 'msms.txt' and the corresponding raw file, but got an error. peptdeep_transfer.log

jalew188 commented 1 year ago

Can you also share the settings.yaml file?