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ManuSetty
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wishbone
Wishbone is an algorithm to align cells along developmental trajectories with branches
GNU General Public License v2.0
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Wishbone marker selection
#71
wy-18
opened
5 years ago
3
Merge pull request #1 from ManuSetty/master
#70
ManuSetty
closed
5 years ago
0
successfully installed, but no import?
#69
calico2019
opened
5 years ago
8
problem with Analysis =>Wishbone
#68
AlexSount
closed
5 years ago
2
Can't select the gene or markers when using GUI to analysis the CyTOF data
#67
StarXian
closed
5 years ago
0
There is no figure in GUI to analysis CYTOF data
#66
StarXian
closed
5 years ago
0
wishbone_gui.py
#65
StarXian
closed
5 years ago
5
windows cannot recognize sudo command
#64
olivia930709
opened
5 years ago
11
Merge pull request #1 from ManuSetty/master
#63
beruhdejene
closed
5 years ago
12
Problem with GSEA
#62
ghost
closed
6 years ago
4
Problem running GSEA
#61
ibrahimelhamamy
closed
6 years ago
2
How to analyze parameters not used in tSNE/trajectory analysis
#60
Jaceves6
closed
6 years ago
6
set branch parameter in run_wishbone based on user input
#59
pkathail
closed
6 years ago
0
Branching Function
#58
Jaceves6
closed
6 years ago
2
Error using Wishbone
#57
cap76
closed
6 years ago
1
Several fixes in setup.py and core.py
#56
rcannood
closed
6 years ago
1
Fix "AttributeError: module 'scipy.sparse' has no attribute 'csgraph'"
#55
ghuls
closed
6 years ago
2
wishbone_gui.py error
#54
thomaslayton
closed
6 years ago
3
Error when running wb.run_wishbone
#53
marcRDM
closed
6 years ago
14
module 'wishbone' has no attribute 'wb'
#52
marcRDM
closed
6 years ago
5
Waypoints as list
#51
anushishah
closed
7 years ago
4
Adding color scale
#50
anushishah
closed
7 years ago
1
Color cells by phenotype information.
#49
anushishah
closed
7 years ago
3
saving figures to file instead of displaying them
#48
jjenny
closed
7 years ago
0
Pre normalised dataset
#47
anushishah
closed
7 years ago
8
plot_tsne_by_cell_sizes() question.
#46
anushishah
closed
7 years ago
3
Colors in diffusion components
#45
anushishah
closed
7 years ago
1
module 'wishbone' has no attribute 'wb'
#44
ToriiKotaro
closed
7 years ago
3
Diffusion components
#43
anushishah
closed
7 years ago
2
Branch point and starting cell plotting.
#42
anushishah
closed
7 years ago
2
plot_marker_trajectory() error
#41
anushishah
closed
7 years ago
6
Setting seed for tSNE
#40
anushishah
closed
7 years ago
2
scdata.run_diffusion_map_correlations()
#39
agelber
closed
7 years ago
1
Change from_csv to read_csv and allow cell_axis option
#38
iandriver
closed
7 years ago
1
module 'wishbone' has no attribute 'wb'
#37
agelber
closed
7 years ago
6
Updated shortest path determination to reflect networkx return struct…
#36
ManuSetty
closed
7 years ago
0
Updated contact information
#35
ManuSetty
closed
7 years ago
0
Re. Branching
#34
macsharma
closed
7 years ago
7
Re. Pseudotemporal ordering
#33
macsharma
closed
7 years ago
2
Develop
#32
ManuSetty
closed
8 years ago
0
Problem running gsea
#31
tjnitram
closed
8 years ago
1
ValueError: Buffer dtype mismatch, expected 'float64_t' but got 'float'
#30
mchill2
closed
8 years ago
1
Error when running wb.run_wishbone
#29
vlatkaa
closed
8 years ago
3
tSNE ValueError with reduced rows/cells in scseq datasets
#28
JamesBadger
closed
8 years ago
2
ValueError when loading from pickled scdata
#27
Colelyman
closed
8 years ago
2
Develop
#26
ManuSetty
closed
8 years ago
0
Gui load save
#25
ManuSetty
closed
8 years ago
1
Save and load results through GUI
#24
ManuSetty
closed
8 years ago
1
Mass cyt gui
#23
ManuSetty
closed
8 years ago
0
Error loading FCS data with GUI
#22
peterch405
closed
8 years ago
3
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