Error in .extract_coord(x = x, slice = slice, img = img) : !is.null(colnames(x)) is not TRUE

MarcElosua / SPOTlight

Spatial Transcriptomics Capture Location Deconvolution

https://marcelosua.github.io/SPOTlight

GNU General Public License v3.0

164 stars 25 forks source link

Error in .extract_coord(x = x, slice = slice, img = img) : !is.null(colnames(x)) is not TRUE #113

Open Noralii opened 7 months ago

Noralii commented 7 months ago

plotSpatialScatterpie( x = spe, y = mat, cell_types = colnames(mat), img = FALSE, scatterpie_alpha = 1, pie_scale = 0.4) + scale_fill_manual( values = pal, breaks = names(pal)) Error in .extract_coord(x = x, slice = slice, img = img) : !is.null(colnames(x)) is not TRUE

MarcElosua commented 7 months ago

Hi, thank you for your interest in SPOTlight! Could you please provide a bit more information please?