MarcLavielle
commented
6 years ago Hi Nicolas,
I was not able to reproduce this bug... :-) or :-( ? can you send me the project please?
best, Marc
2018-04-10 15:31 GMT+02:00 Nicolas Azzopardi notifications@github.com:
Dear Marc,
I used to compute AUC over time in the OUTPUT block of Monolix 4.x (table={AUC}). In (The excellent) Monolix2018R1, it is not possible anymore outside observation times...
So I tried to do it with SimulX as explained here ( http://simulx.webpopix.org/userguide/monolix1/):
In "~/Lixoft/MonolixSuite2018R1/resources/demos/monolix/1. creating_and_using_models/1.1.libraries_of_models" folder I ran in R:
if (isAwesome){ library(mlxR)project.file <- 'theophylline_project.mlxtran'out1 <- list(name = 'Cc', time = seq(0, 25, by=0.1))sim.param <- "mode"res5 <- simulx(project = project.file, output = out1, parameter = sim.param) }
Works just fine!!
I tried to use the same parameter "mode" for my Monolix project but it felt with the not so obvious error:
if (isAwesome){Error in
$<-.data.frame(*tmp*, id, value = 23L) : replacement has 1 row, data has 0 }After some tests, I figure out that the cause of this error was the presence of "table={AUC}" in the monolix model file...
It may be interesting to have a more explicit error message.
Kind regards, Nicolas
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Marc Lavielle
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Francehttps://soutienvenezuela.org/en/ Tel: (33) 1 69 33 46 00 (33) 6 37 31 93 05
Marc.Lavielle@inria.fr http://www.cmap.polytechnique.fr/~lavielle
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Dear Marc,
I used to compute AUC over time in the OUTPUT block of Monolix 4.x (table={AUC}). In (The excellent) Monolix2018R1, it is not possible anymore outside observation times...
So I tried to do it with SimulX as explained here (http://simulx.webpopix.org/userguide/monolix1/):
In "~/Lixoft/MonolixSuite2018R1/resources/demos/monolix/1.creating_and_using_models/1.1.libraries_of_models" folder I ran in R:
Works just fine!!
I tried to use the same parameter "mode" for my Monolix project but it felt with the not so obvious error:
After some tests, I figure out that the cause of this error was the presence of "table={AUC}" in the monolix structural model file...
It may be interesting to have a more explicit error message.
Kind regards, Nicolas