Can I detect the Inversion?

MariaNattestad / Assemblytics

Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference genome.

http://assemblytics.com

MIT License

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Can I detect the Inversion? #38

Closed shehongbing closed 3 years ago

shehongbing commented 3 years ago

Hi, Can I detect the inversion using the Assemblytics.

Thx

Sincerely, She

MariaNattestad commented 3 years ago

No, Assemblytics doesn't try to detect inversions. See the paper in Bioinformatics or BioRxiv for more information about what variant types are supported.