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MarioniLab / MammaryGland

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Use org.Mm.eg.db to convert from Entrez to Ensembl #5

Closed LTLA closed 7 years ago

LTLA commented 7 years ago

In getTFcheckpoint.R; save yourself problems with the availability of Biomart servers. It's easy:

library(org.Mm.eg.db)
my.ids <- as.character(tfcheckpoint$entrez_mouse)
anno <- select(org.Mm.eg.db, keys=my.ids, column="ENSEMBL")