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MarioniLab / StabMap

Mosaic single cell data integration using non-overlapping features
https://MarioniLab.github.io/StabMap/
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Work with SingleCellExperiment or MultiAssayExperiment #2

Closed shazanfar closed 2 years ago

shazanfar commented 2 years ago

Mosaic data is entered as a list of matrices where each matrix is the assay of a given dataset, perhaps write a function to take in list of either SCE or MAE objects with argument identifying assays to extract

shazanfar commented 2 years ago

added stabMapSE function that takes in SummarizedExperiment type objects (including SingleCellExperiment, SpatialExperiment, etc)