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MarioniLab / scran

Clone of the Bioconductor repository for the scran package.
https://bioconductor.org/packages/devel/bioc/html/scran.html
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"assay.type" in the modelGeneVarByPoisson man page #81

Closed ycl6 closed 3 years ago

ycl6 commented 3 years ago

Like modelGeneVarWithSpikes, the specified assay should contain counts instead of logcounts.

https://github.com/MarioniLab/scran/blob/424c5ce8f07548b85b0f002b3b51c655aa7957d6/man/modelGeneVarByPoisson.Rd#L69

LTLA commented 3 years ago

Well spotted, thanks.