Open RubenBSB opened 2 years ago
Description When using edlib.align with an empty query and task='path', the cigar is 'None'.
To Reproduce
result = edlib.align("", "abc", task="path") edlib.getNiceAlignment(result, "", "abc")
This raises the following error :
Exception: The object alignResult contains an empty CIGAR string. Users must run align() with task='path'. Please check the input alignResult
Expected behavior In my opinion, the cigar should indicate 3 deletions from the target in this case :
cigar = 3D
Environment
Description When using edlib.align with an empty query and task='path', the cigar is 'None'.
To Reproduce
This raises the following error :
Expected behavior In my opinion, the cigar should indicate 3 deletions from the target in this case :
Environment