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MassBank / MassBank-web

The web server application and directly connected components for a MassBank web server
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Maintaining External information about MassBank: identifiers.org #128

Open sneumann opened 6 years ago

sneumann commented 6 years ago

Hi, this issue is to keep track of any changes we want to have against the identifiers.org at https://www.ebi.ac.uk/miriam/main/collections/MIR:00000273

sneumann commented 6 years ago

There is currently a note at https://www.ebi.ac.uk/miriam/main/restrictions/MIR:00000273 saying

One restriction has been associated to this data collection:
Downloading, copying, saving, or printing out of materials for purposes other than academic research or education is prohibited.

This comes from the very early massbank.jp usage policy, which has been superseded by the LICENSE in each record. I'd like to tell the identifiers.org maintainers that this restriction is gone now. Yours, Steffen

tsufz commented 5 years ago

Hi, I agree. The description should be also changed, for example:

MassBank is a federated database of reference spectra from different instruments, including high-resolution mass spectra of small metabolites and chemicals of environmental concern (<3000 Da).

schymane commented 5 years ago

I thought small molecules were generally defined as <1000, 1500 or 2000 Da (definitions vary) but 3000 seems a little large and is outside the mz range of most instruments in MassBank? As far as I know most HR-MS instruments scan to either 1000 or 2000 for small molecules? Not sure what the EI records in MassBank look like in terms of range though.

tsufz commented 5 years ago

There is currently a note at https://www.ebi.ac.uk/miriam/main/restrictions/MIR:00000273 saying

One restriction has been associated to this data collection:
Downloading, copying, saving, or printing out of materials for purposes other than academic research or education is prohibited.

This comes from the very early massbank.jp usage policy, which has been superseded by the LICENSE in each record. I'd like to tell the identifiers.org maintainers that this restriction is gone now. Yours, Steffen

@sneumann How can we change entries here? Helmholtz and DENBI should be more visible. And the deep link is wrong.

tsufz commented 4 years ago

@sneumann I guess, we need to register again. The record is missing at all.

sneumann commented 4 years ago

I think this now turned into https://registry.identifiers.org/registry/massbank