MaterialsGalaxy / larch-tools

Galaxy tool wrappers for Larch analysis tools for X-ray spectroscopy
MIT License
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Larch Plot: use flat instead of norm #43

Closed patrick-austin closed 5 months ago

patrick-austin commented 6 months ago

Larch Athena plots using .flat which is labeled "normalised" on the x axis but the Dataset is correctly labelled as "flattened".

Larch Plot uses the label "normalise" in both the input and the axis, and actually plots .norm which does not have the post edge fitting applied.

The flattened plot is more useful, so both tools should return this and label it as explicitly as possible.

Additionally, it should be possible to only select a subset of the plots for Athena, and these should be subplots on one .png output to limit the clutter in a user's history.