Problem with sample processing for Indels

MathOnco / NeoPredPipe

Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.

GNU Lesser General Public License v3.0

100 stars 28 forks source link

Problem with sample processing for Indels #34

Open rschenck opened 2 years ago

rschenck commented 2 years ago

Known issue with processing intel output. Good news is that the error is when there are no indels present to process. Doesn't effect anything else except some downstream outputs. Expect a file for indels that are empty.