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MathOnco / NeoPredPipe

Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.
GNU Lesser General Public License v3.0
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BeoClass bug: in python 3 filter return an iterator. #39

Closed tucano closed 1 year ago

tucano commented 1 year ago

As for title, with python 3 filter return an iterator that you should cast to list.

With python 3:

TypeError: 'filter' object is not subscriptable.

I have a pull request from this that check for filter features: https://github.com/MathOnco/NeoPredPipe/pull/40 :-)

elakatos commented 1 year ago

Thanks a lot for the fix! (I realised I never merged this fix from my local copy, but your fix is better!)