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Mathelab / ALTRE

ALTered Regulatory Elements
http://mathelab.github.io/ALTRE/
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pathway enrichment heatmap #7

Closed Mathelab closed 8 years ago

Mathelab commented 8 years ago

to ensure readability of results, the heatmap showing pathway enrichment should be capped to 10 pathways per each RE type. Users can then download results from Excel file and modify if needed. Or we could include a parameter so users chose how many pathways they want to input...

Mathelab commented 8 years ago

Modifed the enrichHeatmap function so that it now takes in the variable "numshow", which is the number of top pathways (ordered according to p-value) to show

Now we need to add a shiny button so users can change numshow.